Table 1

Frameshift and control peptides used in this study.

Protein Peptide Theoretical Score c Fluorescence index d
Name Accession no. a Name Sequence b Ken Parker SYFPEITHI
Growth regulated protein P68 226021 P68 128-YLLPAIVHI 551 30 2.96
Caspase-5(-1) U28015 FSP25 61-KMFFMVFLI 1301 20 1.29
FSP26 67-FLIIWQNTM 22.8 21 3.24
TAF-1b(-1) L39061 FSP27 108-GMCVKVSSI 17 24 0.15
FSP29 105-AGIGMCVKV 1 20 0.01
HT001(-1) NP 054784 FSP30 281-VLRTEGEPL n.d. 21 0.01

aProtein or nuleotide accession numbers are indicated. bPosition of the start amino acid in the protein is indicated. cPredicted binding score to HLA-A0201 using computer-assisted analysis. dIndex = (mean fluorescence with peptide - mean fluorescence without peptide) / (mean fluorescence without peptide)