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Combined BRAF, MEK, and CDK4/6 Inhibition Depletes Intratumoral Immune-Potentiating Myeloid Populations in Melanoma

Emily J. Lelliott, Stefano Mangiola, Kelly M. Ramsbottom, Magnus Zethoven, Lydia Lim, Peter K.H. Lau, Amanda J. Oliver, Luciano G. Martelotto, Laura Kirby, Claire Martin, Riyaben P. Patel, Alison Slater, Carleen Cullinane, Anthony T. Papenfuss, Nicole M. Haynes, Grant A. McArthur, Jane Oliaro and Karen E. Sheppard
Emily J. Lelliott
1Cancer Research Division, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
2Sir Peter MacCallum Department of Oncology, University of Melbourne, Parkville, Victoria, Australia.
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  • ORCID record for Emily J. Lelliott
Stefano Mangiola
3The Walter and Eliza Hall Institute of Medical Research, Parkville, Victoria, Australia.
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Kelly M. Ramsbottom
1Cancer Research Division, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
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Magnus Zethoven
1Cancer Research Division, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
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  • ORCID record for Magnus Zethoven
Lydia Lim
1Cancer Research Division, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
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Peter K.H. Lau
1Cancer Research Division, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
2Sir Peter MacCallum Department of Oncology, University of Melbourne, Parkville, Victoria, Australia.
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Amanda J. Oliver
1Cancer Research Division, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
2Sir Peter MacCallum Department of Oncology, University of Melbourne, Parkville, Victoria, Australia.
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Luciano G. Martelotto
4Single Cell Innovation Laboratory, The University of Melbourne, Parkville, Victoria, Australia.
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Laura Kirby
1Cancer Research Division, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
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Claire Martin
1Cancer Research Division, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
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Riyaben P. Patel
1Cancer Research Division, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
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Alison Slater
1Cancer Research Division, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
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Carleen Cullinane
1Cancer Research Division, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
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Anthony T. Papenfuss
1Cancer Research Division, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
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Nicole M. Haynes
1Cancer Research Division, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
2Sir Peter MacCallum Department of Oncology, University of Melbourne, Parkville, Victoria, Australia.
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Grant A. McArthur
1Cancer Research Division, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
2Sir Peter MacCallum Department of Oncology, University of Melbourne, Parkville, Victoria, Australia.
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Jane Oliaro
1Cancer Research Division, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
2Sir Peter MacCallum Department of Oncology, University of Melbourne, Parkville, Victoria, Australia.
5Department of Immunology, Central Clinical School, Monash University, Melbourne, Victoria, Australia.
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Karen E. Sheppard
1Cancer Research Division, Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
2Sir Peter MacCallum Department of Oncology, University of Melbourne, Parkville, Victoria, Australia.
6Department of Biochemistry and Molecular Biology, University of Melbourne, Parkville, Victoria, Australia.
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  • For correspondence: karen.sheppard@petermac.org
DOI: 10.1158/2326-6066.CIR-20-0401
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Abstract

Combined inhibition of BRAF, MEK, and CDK4/6 is currently under evaluation in clinical trials for patients with melanoma harboring a BRAFV600 mutation. While this triple therapy has potent tumor-intrinsic effects, the impact of this combination on antitumor immunity remains unexplored. Here, using a syngeneic BrafV600ECdkn2a−/−Pten−/− melanoma model, we demonstrated that triple therapy promoted durable tumor control through tumor-intrinsic mechanisms and promoted immunogenic cell death and T-cell infiltration. Despite this, tumors treated with triple therapy were unresponsive to immune checkpoint blockade (ICB). Flow cytometric and single-cell RNA sequencing analyses of tumor-infiltrating immune populations revealed that triple therapy markedly depleted proinflammatory macrophages and cross-priming CD103+ dendritic cells, the absence of which correlated with poor overall survival and clinical responses to ICB in patients with melanoma. Indeed, immune populations isolated from tumors of mice treated with triple therapy failed to stimulate T-cell responses ex vivo. While combined BRAF, MEK, and CDK4/6 inhibition demonstrates favorable tumor-intrinsic activity, these data suggest that collateral effects on tumor-infiltrating myeloid populations may impact antitumor immunity. These findings have important implications for the design of combination strategies and clinical trials that incorporate BRAF, MEK, and CDK4/6 inhibition with immunotherapy for the treatment of patients with melanoma.

Footnotes

  • Note: Supplementary data for this article are available at Cancer Immunology Research Online (http://cancerimmunolres.aacrjournals.org/).

  • Cancer Immunol Res 2021;XX:XX–XX

  • Received May 13, 2020.
  • Revision received September 14, 2020.
  • Accepted December 4, 2020.
  • Published first December 10, 2020.
  • ©2020 American Association for Cancer Research.
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This OnlineFirst version was published on January 7, 2021
doi: 10.1158/2326-6066.CIR-20-0401

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Combined BRAF, MEK, and CDK4/6 Inhibition Depletes Intratumoral Immune-Potentiating Myeloid Populations in Melanoma
Emily J. Lelliott, Stefano Mangiola, Kelly M. Ramsbottom, Magnus Zethoven, Lydia Lim, Peter K.H. Lau, Amanda J. Oliver, Luciano G. Martelotto, Laura Kirby, Claire Martin, Riyaben P. Patel, Alison Slater, Carleen Cullinane, Anthony T. Papenfuss, Nicole M. Haynes, Grant A. McArthur, Jane Oliaro and Karen E. Sheppard
Cancer Immunol Res January 7 2021 DOI: 10.1158/2326-6066.CIR-20-0401

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Combined BRAF, MEK, and CDK4/6 Inhibition Depletes Intratumoral Immune-Potentiating Myeloid Populations in Melanoma
Emily J. Lelliott, Stefano Mangiola, Kelly M. Ramsbottom, Magnus Zethoven, Lydia Lim, Peter K.H. Lau, Amanda J. Oliver, Luciano G. Martelotto, Laura Kirby, Claire Martin, Riyaben P. Patel, Alison Slater, Carleen Cullinane, Anthony T. Papenfuss, Nicole M. Haynes, Grant A. McArthur, Jane Oliaro and Karen E. Sheppard
Cancer Immunol Res January 7 2021 DOI: 10.1158/2326-6066.CIR-20-0401
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